SUPHD1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE


Available Data

  • Vendor Karyotype
  • Amplicon Architect Prediction

ID Value
ATCC None
DSMZ ACC-574
Cellosaurus None
Cosmic 1331039.0

Property Value
% Polyploidy 4.0
Ploidy Classification hyperdiploid
Modal Chromosome Number 48.0
Modal Range Numeric 44-48
Marker Chromosomes Average Field 1.0
Primary or Metastasis None
Count of SV's 24

Details

ecDNA Present (Y/N/P): N

HSR Classification: N

ATCC Karyotype: No data

DSMZ Karyotype: human highly rearranged hyperdiploid karyotype with 4% polyploidy - 48(44-48)<2n>X, -Y, +5, +8, +9, -13, +19, +mar, der(1)t(1;1)(p34;q12.2), del(2)(p23), ins(2;8)t(p2?3;??), add(4)(p15), add(4)(q23), add(5)(p1?1), i(5p), der(5)t(5;15)(p10;p10), del(6)(p23), der(6)i(6)(q10)der(6)t(6;9)(q2?5;p2?1), der(8)add(8)(p11)add(8)(q2?4), der(8)t(8;12)(p22;?p12), del(9)(q3?2), der(9)t(9;12)(q31;?p12), i(9q), der(11)t(4;11)(?p15;p15), del(11)(q22.2), add(12)(p13), i(14q), der(15)t(2;15)(?p23;q26), i(18q), der(19)del(19)(p12)add(19(q13), del(21)(q22), der(22)t(13;22)(q31;q22.3) - sdl with del(1)(p32), i(14)(q10)del(14)(q11q13-21) - resembles published karyotype

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Linear amplification', 'Complex non-cyclic', 'ecDNA', 'BFB']

Predicted Genes on ecDNA

['ARID4B', 'RBM34', 'SNORA14B', 'TOMM20']

Predicted Features

Class Amplicon Complexity Score
Linear amplification 1 0.4755365945
Image 1

Class Amplicon Complexity Score
Linear amplification 2 0.3464495436
Image 2

Class Amplicon Complexity Score
Complex non-cyclic 3 1.26177279
Image 3

Class Amplicon Complexity Score
ecDNA 4 0.645163983
Image 4

Class Amplicon Complexity Score
Linear amplification 5 0.5600479829
Image 5

Class Amplicon Complexity Score
BFB 6 1.255467193
Image 6

Prediction

ecDNA: None


Prediction

No data