SNU119_OVARY


Available Data

  • Amplicon Architect Prediction
  • Shatterseek Prediction

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Complex non-cyclic', 'Linear amplification', 'ecDNA']

Predicted Genes on ecDNA

['KLHDC1', 'POLE2']

Predicted Features

Class Amplicon Complexity Score
Complex non-cyclic 1 1.70894544
Image 1

Class Amplicon Complexity Score
Linear amplification 2 3e-10
Image 2

Class Amplicon Complexity Score
Linear amplification 3 1.106620349
Image 3

Class Amplicon Complexity Score
Linear amplification 4 0.1137442744
Image 4

Class Amplicon Complexity Score
Linear amplification 5 1.145743313
Image 5

Class Amplicon Complexity Score
ecDNA 6 0.5596591724
Image 6

Class Amplicon Complexity Score
Linear amplification 7 0.740519039
Image 7

Prediction

ecDNA: None


Prediction

Shatterseek Prediction: Low Confidence

Shatterseek High Confidence Chromosomes: None

Shatterseek Low Confidence Chromosomes: 1, 4, 15, 21