Available Data

Vendor Karyotype
Amplicon Architect Prediction

ID	Value
ATCC	None
DSMZ	ACC-127
Cellosaurus	None
Cosmic	909706.0

Karyotype Details

Property	Value
% Polyploidy	30.0
Ploidy Classification	triploid
Modal Chromosome Number	69.0
Modal Range Numeric	60-70
Marker Chromosomes Average Field	1.0
Primary or Metastasis	Metastasis
Count of SV's	8

Details

ecDNA Present (Y/N/P): N

HSR Classification: N

ATCC Karyotype: No data

DSMZ Karyotype: human near-triploid karyotype with 30% polyploidy - 69(60-70)<3n>XXY, -10, +13, -15, +16, -20, +mar, del(6)(q15), add(8)(q24), del(9)(p22), der(9)t(7;9)(q12;q34)x2, add(11)(q24-25), ins(12;abr)(?q13), der(13)(t(6;13)(p13;q33)x2-3, add(19)(p13)

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA', 'Complex non-cyclic']

Predicted Genes on ecDNA

['CEP83', 'CEP83-DT', 'CRADD', 'EEA1', 'KRT19P2', 'MRPL42', 'NUDT4', 'PLXNC1', 'SOCS2', 'SOCS2-AS1', 'TMCC3', 'UBE2N', 'MITF']

Predicted Features

View Feature 1 - RVH421_SKIN ecDNA

Class	Amplicon	Complexity Score
ecDNA	1	0.484635813

View Feature 2 - RVH421_SKIN ecDNA

Class	Amplicon	Complexity Score
ecDNA	2	1.08989425

View Feature 3 - RVH421_SKIN Complex non-cyclic

Class	Amplicon	Complexity Score
Complex non-cyclic	3	1.222078188

Prediction

ecDNA: None

Prediction

No data