RMGI_OVARY


Available Data

  • Amplicon Architect Prediction

ID Value
ATCC None
DSMZ None
Cellosaurus None
Cosmic 909699.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA', 'BFB', 'Linear amplification', 'Complex non-cyclic']

Predicted Genes on ecDNA

['DDI2', 'PLEKHM2', 'RSC1A1', 'SLC25A34', 'SLC25A34-AS1', 'TMEM82', 'CHCHD5', 'CKAP2L', 'FLJ42351', 'NT5DC4', 'POLR1B', 'SLC20A1', 'TTL', 'PAX8', 'PAX8-AS1', 'PSD4', 'FAM193A', 'FGFR3', 'LETM1', 'SH3BP2', 'TACC3', 'TNIP2', 'AKAP1', 'ANKFN1', 'C17orf67', 'CCDC182', 'COIL', 'DGKE', 'MRPS23', 'MSI2', 'MTVR2', 'NOG', 'PCTP', 'RNF126P1', 'SCPEP1', 'TMEM100', 'TRIM25', 'BRI3BP', 'DHX37', 'THRIL', 'UBC', 'FOS', 'NEK9', 'TMED10']

Predicted Features

Class Amplicon Complexity Score
BFB 10 0.7394289082
Image 1

Class Amplicon Complexity Score
ecDNA 1 0.6894530159
Image 2

Class Amplicon Complexity Score
Linear amplification 2 0.9373061379
Image 3

Class Amplicon Complexity Score
ecDNA 3 0.6743894915
Image 4

Class Amplicon Complexity Score
ecDNA 4 0.74519973
Image 5

Class Amplicon Complexity Score
ecDNA 5 0.6704346731
Image 6

Class Amplicon Complexity Score
Complex non-cyclic 6 1.56288239
Image 7

Class Amplicon Complexity Score
ecDNA 7 0.5961725999
Image 8

Class Amplicon Complexity Score
ecDNA 8 0.6926562974
Image 9

Class Amplicon Complexity Score
ecDNA 9 0.6721427698
Image 10

Prediction

ecDNA: None


Prediction

No data