NCIH526_LUNG


Available Data

  • ecDNA Presence Verification from Literature
  • Amplicon Architect Prediction

ID Value
ATCC CRL-5811
DSMZ None
Cellosaurus NCI-H526
Cosmic 688025.0

Details

ecDNA Present (Y/N/P): Y

Literature source: https://aacrjournals.org/cancerdiscovery/article/13/4/928/725029/Extrachromosomal-DNA-Amplification-Contributes-to

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Linear amplification', 'ecDNA']

Predicted Genes on ecDNA

['DDX1', 'GACAT3', 'MYCN', 'MYCNOS', 'MYCNUT', 'NBAS']

Predicted Features

Class Amplicon Complexity Score
Linear amplification 1 0.0918294143
Image 1

Class Amplicon Complexity Score
Linear amplification 2 0.4623582767
Image 2

Class Amplicon Complexity Score
ecDNA 3 1.555043838
Image 3

Class Amplicon Complexity Score
Linear amplification 4 0.0
Image 4

Class Amplicon Complexity Score
Linear amplification 5 0.958818493
Image 5

Prediction

ecDNA: None


Prediction

No data