NCIH3255_LUNG


Available Data

  • Amplicon Architect Prediction
  • Shatterseek Prediction

ID Value
ATCC CRL-2882
DSMZ None
Cellosaurus NCI-H3255
Cosmic None

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Complex non-cyclic', 'ecDNA', 'Linear amplification', 'BFB']

Predicted Genes on ecDNA

['PCDH19', 'SRPX2', 'SYTL4', 'TNMD', 'TSPAN6']

Predicted Features

Class Amplicon Complexity Score
ecDNA 12 0.6834464399
Image 1

Class Amplicon Complexity Score
Linear amplification 15 1.257612767
Image 2

Class Amplicon Complexity Score
Complex non-cyclic 1 1.389709474
Image 3

Class Amplicon Complexity Score
Complex non-cyclic 2 1.971322732
Image 4

Class Amplicon Complexity Score
Linear amplification 3 0.6795936526
Image 5

Class Amplicon Complexity Score
Linear amplification 4 1.016591822
Image 6

Class Amplicon Complexity Score
Linear amplification 5 1.067997108
Image 7

Class Amplicon Complexity Score
Complex non-cyclic 6 1.635131907
Image 8

Class Amplicon Complexity Score
BFB 7 0.9215055648
Image 9

Class Amplicon Complexity Score
ecDNA 8 0.5862494659
Image 10

Prediction

ecDNA: None


Prediction

Shatterseek Prediction: High Confidence

Shatterseek High Confidence Chromosomes: 22

Shatterseek Low Confidence Chromosomes: X