Property | Value |
---|---|
% Polyploidy | 1.3 |
Ploidy Classification | hyperdiploid |
Modal Chromosome Number | 49.0 |
Modal Range Numeric | 47-57 |
Marker Chromosomes Average Field | 11.0 |
Primary or Metastasis | Metastasis |
Count of SV's | 6 |
ecDNA Present (Y/N/P): N
Literature source:
https://aacrjournals.org/cancerdiscovery/article/13/4/928/725029/Extrachromosomal-DNA-Amplification-Contributes-to
HSR Classification: Y
ATCC Karyotype: This is a hyperdiploid human cell line., The modal chromosome number is 49, occurring at 28% with a frequency of higher ploidies of 1.3%. Ten to eleven markers were common to all cells including: der(1)t(1;3)(p22;p21), del(6)(q21), t(8q18q), del(12)(q13), der(14)t(14;?)(q32;?)., All had a single copy per cell. About 6 other markers were found, but they occurred only once in all metaphases karyotyped. Neither HSR nor DM were detected., Structurally normal B group chromosomes were not detected. All C group chromosomes were paired. A single copy of both the X and Y was found in all cells.
DSMZ Karyotype: No data
Heterogeneity Indications and Other Notes: Neither HSR nor DM were detected
ecDNA Amplicon Predicted: N
Predicted Amplicon Classes: ['Linear amplification']
View Feature 1 - NCIH209_LUNG Linear amplification
Class | Amplicon | Complexity Score |
---|---|---|
Linear amplification | 1 | 0.6828581225 |
ecDNA: negative
Shatterseek Prediction: High Confidence
Shatterseek High Confidence Chromosomes: 6
Shatterseek Low Confidence Chromosomes: None