NCIH2030_LUNG


Available Data

  • Amplicon Architect Prediction
  • Shatterseek Prediction

ID Value
ATCC CRL-5914
DSMZ None
Cellosaurus NCI-H2030
Cosmic 722045.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA', 'Linear amplification', 'Complex non-cyclic']

Predicted Genes on ecDNA

['ACADL', 'CCDC57', 'KANSL1L', 'KANSL1L-AS1', 'RPE']

Predicted Features

Class Amplicon Complexity Score
ecDNA 1 0.6853162758
Image 1

Class Amplicon Complexity Score
ecDNA 2 0.6102046879
Image 2

Class Amplicon Complexity Score
Linear amplification 3 0.4236236593
Image 3

Class Amplicon Complexity Score
Complex non-cyclic 4 1.994697661
Image 4

Class Amplicon Complexity Score
Linear amplification 5 1.275644176
Image 5

Class Amplicon Complexity Score
Linear amplification 6 0.0
Image 6

Class Amplicon Complexity Score
Linear amplification 9 1.022945355
Image 7

Prediction

ecDNA: None


Prediction

Shatterseek Prediction: Low Confidence

Shatterseek High Confidence Chromosomes: None

Shatterseek Low Confidence Chromosomes: 4