NCIH2009_LUNG


Available Data

  • ecDNA Presence Verification from Literature
  • Amplicon Architect Prediction
  • Circle Hunter Prediction

ID Value
ATCC CRL-5911
DSMZ None
Cellosaurus NCI-H2009
Cosmic 724873.0

Details

ecDNA Present (Y/N/P): Y

Literature source: https://www.sciencedirect.com/science/article/pii/S0165460805001561

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: N

Predicted Amplicon Classes: ['Complex non-cyclic', 'Linear amplification']

Predicted Genes on ecDNA

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Predicted Features

Class Amplicon Complexity Score
Complex non-cyclic 1 1.622161792
Image 1

Class Amplicon Complexity Score
Linear amplification 2 0.0065017332
Image 2

Class Amplicon Complexity Score
Linear amplification 3 0.0
Image 3

Class Amplicon Complexity Score
Linear amplification 4 0.5686074685
Image 4

Class Amplicon Complexity Score
Linear amplification 5 0.0
Image 5

Prediction

ecDNA: positive

Genes: RPL39P38


Prediction

No data