NCIH1930_LUNG


Available Data

  • Vendor Karyotype
  • ecDNA Presence Verification from Literature
  • Amplicon Architect Prediction
  • Shatterseek Prediction

ID Value
ATCC CRL-5906
DSMZ None
Cellosaurus NCI-H1930
Cosmic None

Property Value
% Polyploidy None
Ploidy Classification None
Modal Chromosome Number None
Modal Range Numeric None
Marker Chromosomes Average Field None
Primary or Metastasis Metastasis
Count of SV's

Details

ecDNA Present (Y/N/P): No data

Literature source: https://aacrjournals.org/cancerdiscovery/article/13/4/928/725029/Extrachromosomal-DNA-Amplification-Contributes-to

HSR Classification: No data

ATCC Karyotype: del(p13-p21)

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: N

Predicted Amplicon Classes: ['BFB']

Predicted Genes on ecDNA

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Predicted Features

Class Amplicon Complexity Score
BFB 1 1.488472313
Image 1

Prediction

ecDNA: None


Prediction

Shatterseek Prediction: Low Confidence

Shatterseek High Confidence Chromosomes: None

Shatterseek Low Confidence Chromosomes: 1, 2, 2004