NCIH1703_LUNG


Available Data

  • Amplicon Architect Prediction
  • Shatterseek Prediction

ID Value
ATCC CRL-5889
DSMZ None
Cellosaurus NCI-H1703
Cosmic 908474.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Linear amplification', 'ecDNA', 'BFB']

Predicted Genes on ecDNA

['SPATA18', 'USP46', 'USP46-AS1']

Predicted Features

Class Amplicon Complexity Score
Linear amplification 1 0.6899678573
Image 1

Class Amplicon Complexity Score
ecDNA 2 0.6604575777
Image 2

Class Amplicon Complexity Score
BFB 3 1.232956401
Image 3

Class Amplicon Complexity Score
Linear amplification 4 0.6641202378
Image 4

Class Amplicon Complexity Score
Linear amplification 5 0.064157487
Image 5

Class Amplicon Complexity Score
Linear amplification 6 0.6752620352
Image 6

Prediction

ecDNA: None


Prediction

Shatterseek Prediction: Low Confidence

Shatterseek High Confidence Chromosomes: None

Shatterseek Low Confidence Chromosomes: 11