Available Data

Amplicon Architect Prediction

ID	Value
ATCC	CRL-5887
DSMZ	None
Cellosaurus	NCI-H1693
Cosmic	687802.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA', 'Complex non-cyclic', 'Linear amplification']

Predicted Genes on ecDNA

['ARHGAP12', 'ARMC4', 'BAMBI', 'C10orf126', 'CCDC7', 'EPC1', 'GOLGA2P6', 'JCAD', 'KIF5B', 'LYZL1', 'LYZL2', 'MAP3K8', 'MKX', 'MKX-AS1', 'MPP7', 'MTPAP', 'SNORD130', 'SVIL', 'SVIL-AS1', 'SVIL2P', 'WAC', 'WAC-AS1', 'ZEB1', 'ZEB1-AS1', 'ZNF438', 'ADGRL3', 'ADGRL3-AS1', 'FMNL1', 'MAP3K14', 'MAP3K14-AS1', 'SPATA32']

Predicted Features

View Feature 1 - NCIH1693_LUNG ecDNA

Class	Amplicon	Complexity Score
ecDNA	1	1.001944528

View Feature 2 - NCIH1693_LUNG ecDNA

Class	Amplicon	Complexity Score
ecDNA	2	0.6238714086

View Feature 3 - NCIH1693_LUNG Complex non-cyclic

Class	Amplicon	Complexity Score
Complex non-cyclic	3	2.111350797

View Feature 4 - NCIH1693_LUNG ecDNA

Class	Amplicon	Complexity Score
ecDNA	4	0.4812557776

View Feature 5 - NCIH1693_LUNG Linear amplification

Class	Amplicon	Complexity Score
Linear amplification	5	0.6697412093

Prediction

ecDNA: None

Prediction

No data