NCIH1651_LUNG


Available Data

  • Amplicon Architect Prediction
  • Shatterseek Prediction

ID Value
ATCC CRL-5884
DSMZ None
Cellosaurus NCI-H1651
Cosmic 910900.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Complex non-cyclic', 'Linear amplification', 'ecDNA', 'BFB']

Predicted Genes on ecDNA

['ZNF431', 'ZNF626', 'ZNF66', 'ZNF714']

Predicted Features

Class Amplicon Complexity Score
Linear amplification 10 0.691560418
Image 1

Class Amplicon Complexity Score
Linear amplification 11 0.9666714195
Image 2

Class Amplicon Complexity Score
Linear amplification 12 0.6325087646
Image 3

Class Amplicon Complexity Score
ecDNA 13 0.787588721
Image 4

Class Amplicon Complexity Score
Linear amplification 14 0.6994283325
Image 5

Class Amplicon Complexity Score
Linear amplification 15 0.9470988368
Image 6

Class Amplicon Complexity Score
Linear amplification 16 0.6698226102
Image 7

Class Amplicon Complexity Score
Linear amplification 17 0.976614733
Image 8

Class Amplicon Complexity Score
Complex non-cyclic 18 0.6406412497
Image 9

Class Amplicon Complexity Score
Complex non-cyclic 19 1.314209883
Image 10

Class Amplicon Complexity Score
Complex non-cyclic 1 0.9934265246
Image 11

Class Amplicon Complexity Score
Linear amplification 20 0.1281791187
Image 12

Class Amplicon Complexity Score
BFB 21 0.8930061488
Image 13

Class Amplicon Complexity Score
BFB 22 1.311254573
Image 14

Class Amplicon Complexity Score
Linear amplification 23 0.9412932936
Image 15

Class Amplicon Complexity Score
Linear amplification 24 0.0
Image 16

Class Amplicon Complexity Score
BFB 2 1.076334643
Image 17

Class Amplicon Complexity Score
Linear amplification 3 0.0
Image 18

Class Amplicon Complexity Score
Linear amplification 4 0.6210087354
Image 19

Class Amplicon Complexity Score
Complex non-cyclic 5 1.837375836
Image 20

Class Amplicon Complexity Score
Linear amplification 6 0.1740332737
Image 21

Class Amplicon Complexity Score
Linear amplification 7 0.9627742435
Image 22

Class Amplicon Complexity Score
Complex non-cyclic 8 0.9146743791
Image 23

Class Amplicon Complexity Score
Linear amplification 9 1.214907757
Image 24

Prediction

ecDNA: None


Prediction

Shatterseek Prediction: Low Confidence

Shatterseek High Confidence Chromosomes: None

Shatterseek Low Confidence Chromosomes: 3, 6, 15