NCIH1435_LUNG


Available Data

  • Amplicon Architect Prediction

ID Value
ATCC CRL-5870
DSMZ None
Cellosaurus NCI-H1435
Cosmic 1298347.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Linear amplification', 'ecDNA', 'Complex non-cyclic']

Predicted Genes on ecDNA

['AREG', 'EPGN', 'EREG', 'GOLPH3', 'PDZD2', 'AAMDC', 'ACER3', 'ALG8', 'AQP11', 'CLNS1A', 'GAB2', 'GUCY2EP', 'INTS4', 'KCTD14', 'KCTD21', 'KCTD21-AS1', 'NARS2', 'NDUFC2', 'NDUFC2-KCTD14', 'PAK1', 'RSF1', 'TENM4', 'THRSP', 'TSKU', 'USP35', 'CHD2']

Predicted Features

Class Amplicon Complexity Score
Linear amplification 1 0.5851860124
Image 1

Class Amplicon Complexity Score
ecDNA 2 0.681938774
Image 2

Class Amplicon Complexity Score
ecDNA 3 0.675686315
Image 3

Class Amplicon Complexity Score
ecDNA 4 1.733788206
Image 4

Class Amplicon Complexity Score
Complex non-cyclic 5 0.7096733111
Image 5

Class Amplicon Complexity Score
ecDNA 6 0.5166983883
Image 6

Class Amplicon Complexity Score
Linear amplification 7 0.4271090166
Image 7

Class Amplicon Complexity Score
Linear amplification 8 0.3955364381
Image 8

Prediction

ecDNA: None


Prediction

No data