Available Data

Vendor Karyotype
ecDNA Presence Verification from Literature
Amplicon Architect Prediction

ID	Value
ATCC	CRL-5855
DSMZ	None
Cellosaurus	NCI-H1092
Cosmic	687997.0

Karyotype Details

Property	Value
% Polyploidy	None
Ploidy Classification	None
Modal Chromosome Number	None
Modal Range Numeric	None
Marker Chromosomes Average Field	1.0
Primary or Metastasis	Metastasis
Count of SV's	0

Details

ecDNA Present (Y/N/P): Y

Literature source: https://aacrjournals.org/cancerdiscovery/article/13/4/928/725029/Extrachromosomal-DNA-Amplification-Contributes-to

HSR Classification: N

ATCC Karyotype: del(p12-p23)

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['BFB', 'ecDNA']

Predicted Genes on ecDNA

['BMP8B', 'CAP1', 'COL9A2', 'HEYL', 'HPCAL4', 'MFSD2A', 'MYCL', 'NT5C1A', 'OXCT2', 'PABPC4', 'PABPC4-AS1', 'PPIE', 'PPIEL', 'PPT1', 'RLF', 'SNORA55', 'TMCO2', 'TRIT1', 'ZMPSTE24']

Predicted Features

View Feature 1 - NCIH1092_LUNG BFB

Class	Amplicon	Complexity Score
BFB	1	0.9242106774

View Feature 2 - NCIH1092_LUNG ecDNA

Class	Amplicon	Complexity Score
ecDNA	2	2.205519992

Prediction

ecDNA: None

Prediction

No data