LS_AUTONOMIC_GANGLIA
Available Data
- Amplicon Architect Prediction
Details
ecDNA Present (Y/N/P): No data
HSR Classification: No data
ATCC Karyotype: No data
DSMZ Karyotype: No data
Heterogeneity Indications and Other Notes: No data
Download Breakpoint Edges CSV
Prediction
ecDNA Amplicon Predicted: Y
Predicted Amplicon Classes: ['ecDNA']
Predicted Genes on ecDNA
['ANO1', 'CCND1', 'CPT1A', 'FADD', 'FGF19', 'FGF3', 'FGF4', 'GAL', 'IGHMBP2', 'LRP5', 'LTO1', 'MRGPRD', 'MRGPRF', 'MRGPRF-AS1', 'MRPL21', 'MYEOV', 'PPP6R3', 'SMIM38', 'TESMIN', 'TPCN2', 'AGAP2', 'AGAP2-AS1', 'ARHGAP9', 'ARHGEF25', 'ATP23', 'AVIL', 'B4GALNT1', 'BEST3', 'CCT2', 'CDK4', 'CNOT2', 'CNOT2-DT', 'CPM', 'CPSF6', 'CTDSP2', 'CYP27B1', 'DCTN2', 'DDIT3', 'DTX3', 'EEF1AKMT3', 'FRS2', 'GACAT3', 'GIHCG', 'GLI1', 'GPR182', 'INHBC', 'INHBE', 'KCNMB4', 'KIF5A', 'LGR5', 'LRP1', 'LRP1-AS', 'LRRC10', 'LYZ', 'MARCHF9', 'MARS1', 'MBD6', 'MDM2', 'METTL1', 'MYCN', 'MYCNOS', 'MYCNUT', 'MYO1A', 'MYRFL', 'NAB2', 'NDUFA4L2', 'NEMP1', 'NUP107', 'NXPH4', 'OS9', 'PIP4K2C', 'PTPRB', 'PTPRR', 'R3HDM2', 'RAB3IP', 'RAP1B', 'SHMT2', 'SLC26A10', 'SLC35E3', 'SNORA113', 'SNORA70G', 'STAC3', 'STAT6', 'TAC3', 'TSFM', 'TSPAN31', 'TSPAN8', 'YEATS4', 'ZBTB39']
Predicted Features
View Feature 1 - LS_AUTONOMIC_GANGLIA ecDNA
| Class | Amplicon | Complexity Score |
|---|---|---|
| ecDNA | 1 | 0.6711299472 |
View Feature 2 - LS_AUTONOMIC_GANGLIA ecDNA
| Class | Amplicon | Complexity Score |
|---|---|---|
| ecDNA | 1 | 1.301313152 |
Prediction
ecDNA: None
Prediction
No data