Available Data

Amplicon Architect Prediction

ID	Value
ATCC	CRL-1543
DSMZ	None
Cellosaurus	HOS
Cosmic	907060.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA', 'Linear amplification', 'Complex non-cyclic']

Predicted Genes on ecDNA

['ARHGEF12', 'BSX', 'CLMP', 'CRTAM', 'GRAMD1B', 'GRIK4', 'HSPA8', 'JHY', 'OAF', 'POU2F3', 'SCN3B', 'SNORD14C', 'SNORD14D', 'SNORD14E', 'TLCD5', 'UBASH3B', 'ZNF202', 'ALG12', 'BRD1', 'C22orf34', 'CRELD2', 'IL17REL', 'PIM3', 'TAFA5', 'TTLL8', 'ZBED4']

Predicted Features

View Feature 1 - HOS_BONE ecDNA

Class	Amplicon	Complexity Score
ecDNA	1	0.6927866705

View Feature 2 - HOS_BONE Linear amplification

Class	Amplicon	Complexity Score
Linear amplification	2	0.981634647

View Feature 3 - HOS_BONE ecDNA

Class	Amplicon	Complexity Score
ecDNA	3	0.6888417075

View Feature 4 - HOS_BONE Complex non-cyclic

Class	Amplicon	Complexity Score
Complex non-cyclic	4	0.6931482586

View Feature 5 - HOS_BONE Complex non-cyclic

Class	Amplicon	Complexity Score
Complex non-cyclic	5	1.204839132

View Feature 6 - HOS_BONE Complex non-cyclic

Class	Amplicon	Complexity Score
Complex non-cyclic	6	1.6031663

Prediction

ecDNA: None

Prediction

No data