HEPG2_LIVER


Available Data

  • Vendor Karyotype
  • Amplicon Architect Prediction
  • Circle Hunter Prediction
  • Shatterseek Prediction

ID Value
ATCC HB-8065
DSMZ ACC-180
Cellosaurus Hep-G2
Cosmic None

Property Value
% Polyploidy None
Ploidy Classification hyperdiploid
Modal Chromosome Number 52.0
Modal Range Numeric 47-54
Marker Chromosomes Average Field 2.0
Primary or Metastasis Primary
Count of SV's 4

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: modal number = 55 (range = 50 to 60); has a rearranged chromosome 1

DSMZ Karyotype: human hyperdiploid karyotype - 52(47-54)<2n>XY, +2, +14, +17, +20, +2mar, t(1;21) (p22.2;p11-12), i(17q)/der(17)t(17;17)(p11;q11)

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: N

Predicted Amplicon Classes: ['BFB']

Predicted Genes on ecDNA

[]

Predicted Features

Class Amplicon Complexity Score
BFB 1 0.8384966797
Image 1

Prediction

ecDNA: negative


Prediction

Shatterseek Prediction: High Confidence

Shatterseek High Confidence Chromosomes: 2, 6

Shatterseek Low Confidence Chromosomes: None