HCC15_LUNG
Available Data
- Vendor Karyotype
- Amplicon Architect Prediction
- Shatterseek Prediction
| Property | Value |
|---|---|
| % Polyploidy | 16.0 |
| Ploidy Classification | hypodiploid |
| Modal Chromosome Number | 37.0 |
| Modal Range Numeric | 34-38 |
| Marker Chromosomes Average Field | 1.0 |
| Primary or Metastasis | Primary |
| Count of SV's | 10 |
Details
ecDNA Present (Y/N/P): N
HSR Classification: N
ATCC Karyotype: No data
DSMZ Karyotype: human hypodiploid karyotype with 16% polyploidy - 37(34-38)<2n>X, -X, -4, -13, -14, -17, -18, -19, -20, -22, +1-2mar, del(3)(q13), der(5;19)(q10;q10)add(19)(q13), add(9)(p2?), del(10)(p12-13), add(12)(q24.3), del(20)(?p12), add(22)(q1?) - sideline with add(8)(p12), del(7)(q21)
Heterogeneity Indications and Other Notes: No data
Download Breakpoint Edges CSV
Prediction
ecDNA Amplicon Predicted: N
Predicted Amplicon Classes: ['Linear amplification']
Predicted Genes on ecDNA
[]
Predicted Features
View Feature 1 - HCC15_LUNG Linear amplification
| Class | Amplicon | Complexity Score |
|---|---|---|
| Linear amplification | 1 | 1.116836576 |
Prediction
ecDNA: None
Prediction
Shatterseek Prediction: High Confidence
Shatterseek High Confidence Chromosomes: 9
Shatterseek Low Confidence Chromosomes: 6, 19