DMS454_LUNG


Available Data

  • ecDNA Presence Verification from Literature
  • Amplicon Architect Prediction

Details

ecDNA Present (Y/N/P): N

Literature source: https://aacrjournals.org/cancerdiscovery/article/13/4/928/725029/Extrachromosomal-DNA-Amplification-Contributes-to

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['Complex non-cyclic', 'Linear amplification', 'ecDNA']

Predicted Genes on ecDNA

['VAMP7']

Predicted Features

Class Amplicon Complexity Score
Complex non-cyclic 1 1.31710319
Image 1

Class Amplicon Complexity Score
Linear amplification 2 1.287391189
Image 2

Class Amplicon Complexity Score
Linear amplification 3 0.8991638329
Image 3

Class Amplicon Complexity Score
ecDNA 5 0.4261073116
Image 4

Class Amplicon Complexity Score
Linear amplification 6 0.6889022821
Image 5

Prediction

ecDNA: None


Prediction

No data