DETROIT562_UPPER_AERODIGESTIVE_TRACT


Available Data

  • Vendor Karyotype
  • Amplicon Architect Prediction
  • Circle Hunter Prediction

ID Value
ATCC CCL-138
DSMZ None
Cellosaurus Detroit 562
Cosmic 906837.0

Property Value
% Polyploidy None
Ploidy Classification hypotriploid
Modal Chromosome Number 64.0
Modal Range Numeric 58-128
Marker Chromosomes Average Field 1.0
Primary or Metastasis Metastasis
Count of SV's 0

Details

ecDNA Present (Y/N/P): N

HSR Classification: N

ATCC Karyotype: Modal number = 64; range = 58 to128A large subterminal marker chromosome, arm ratio 3:4, is found in 94% of the cells karyotyped. Five to 6 minute chromosomes are present in each cell. Note: Cytogenetic information is based on initial seed stock at ATCC. Cytogenetic instability has been reported in the literature for some cell lines

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: N

Predicted Amplicon Classes: ['Linear amplification', 'BFB']

Predicted Genes on ecDNA

[]

Predicted Features

Class Amplicon Complexity Score
BFB 10 1.268242861
Image 1

Class Amplicon Complexity Score
Linear amplification 11 0.8086918816
Image 2

Class Amplicon Complexity Score
Linear amplification 1 0.2120115307
Image 3

Class Amplicon Complexity Score
Linear amplification 2 0.3349198103
Image 4

Class Amplicon Complexity Score
Linear amplification 3 0.0232307848
Image 5

Class Amplicon Complexity Score
Linear amplification 4 0.3092681758
Image 6

Class Amplicon Complexity Score
Linear amplification 5 0.0
Image 7

Class Amplicon Complexity Score
Linear amplification 6 0.7549357201
Image 8

Class Amplicon Complexity Score
Linear amplification 7 0.0
Image 9

Class Amplicon Complexity Score
BFB 8 1.335766278
Image 10

Class Amplicon Complexity Score
Linear amplification 9 0.4989331229
Image 11

Prediction

ecDNA: negative


Prediction

No data