Available Data

Amplicon Architect Prediction
Shatterseek Prediction

ID	Value
ATCC	None
DSMZ	None
Cellosaurus	None
Cosmic	910692.0

Details

ecDNA Present (Y/N/P): No data

HSR Classification: No data

ATCC Karyotype: No data

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA']

Predicted Genes on ecDNA

['BMP8A', 'BMP8B', 'CAP1', 'COL9A2', 'EXO5', 'HEYL', 'HPCAL4', 'MACF1', 'MFSD2A', 'MYCL', 'NFYC', 'NFYC-AS1', 'NT5C1A', 'OXCT2', 'OXCT2P1', 'PPIE', 'RIMS3', 'RLF', 'SMAP2', 'TMCO2', 'TRIT1', 'ZFP69', 'ZFP69B', 'ZMPSTE24', 'ZNF684']

Predicted Features

View Feature 1 - COLO668_LUNG ecDNA

Class	Amplicon	Complexity Score
ecDNA	1	1.66927473

Prediction

ecDNA: None

Prediction

Shatterseek Prediction: No Chromothripsis Detected

Shatterseek High Confidence Chromosomes: None

Shatterseek Low Confidence Chromosomes: None