CCRFCEM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE


Available Data

  • Vendor Karyotype
  • ecDNA Presence Verification from Literature
  • Amplicon Architect Prediction

ID Value
ATCC CCL-119
DSMZ ACC-240
Cellosaurus CCRF-CEM
Cosmic 905952.0

Property Value
% Polyploidy None
Ploidy Classification mix(hypertetraploid, diploid)
Modal Chromosome Number 90.0
Modal Range Numeric 88-101
Marker Chromosomes Average Field None
Primary or Metastasis None
Count of SV's 5

Details

ecDNA Present (Y/N/P): N

Literature source: https://www.nature.com/articles/nature21356

HSR Classification: N

ATCC Karyotype: modal number = 47; range = 41 to 95. Fifty karyotypes showed no consistent loss or gain of particular chromosomes. Twenty-eight percent of the cells with 45 chromosomes were C-; 53% of all cells had an extra D and 35% had an extra F. Only N1 and N18 were not affected by gain or loss. No marker chromosomes noted.

DSMZ Karyotype: human near-tetraploid karyotype with extensive subclonal variation - 90(88-101)<4n>XX, -X, -X, +20, +20, t(8;9)(p11;p24)x2, der(9)del(9)(p21-22)del(9)(q11q13-21)x2 - sideline with +5, +21, add(13)(q3?3), del(16)(q12)

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA']

Predicted Genes on ecDNA

[]

Predicted Features

Class Amplicon Complexity Score
ecDNA 1 0.6749636238
Image 1

Prediction

ecDNA: None


Prediction

No data