CAL851_BREAST


Available Data

  • Vendor Karyotype
  • Amplicon Architect Prediction

ID Value
ATCC None
DSMZ ACC-440
Cellosaurus None
Cosmic 910852.0

Property Value
% Polyploidy 8.0
Ploidy Classification hypotriploid
Modal Chromosome Number 60.0
Modal Range Numeric 57-65
Marker Chromosomes Average Field 3.0
Primary or Metastasis Primary
Count of SV's 18

Details

ecDNA Present (Y/N/P): N

HSR Classification: N

ATCC Karyotype: No data

DSMZ Karyotype: human flat-moded hypotriploid karyotype with 8% polyploidy - 60(57-65)<3n>XX/XXX, +2, +5, -8, -10, -12, -13, -14, -15, -16, -16, -17, -18, +?20, -21, -22, +2-4mar, +fra, add(X)(q2?), del(X)(q11), add(1)(p34), del(2)(q?11q?21)x1-2, add(2)(p2?3), der(3)?inv(3)(p24q29)add(3)(qter), der(3)del(3)(p13)dup(3)(?q13?q26)del(3)(q26qter), del(3)(q21), add(4)(q2?9), der(4)t(4;9)(p15;?q22), der(6)t(6;12)(q22-24;q13), add(7)(p11), del(7)(q32)x2, der(9)dup(9)(p11p24)add(9)(p24), add(11)(q24-25)x1-2, del(12)(p13), der(15;21)(q10;q10), add(17)(p13), add(17)(p13), add(19)(p13), der(?20)t(17;20)(q12;q13)dup(17)(q1?2q2?3), add(21)(p11)

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: Y

Predicted Amplicon Classes: ['ecDNA', 'Linear amplification']

Predicted Genes on ecDNA

['AHI1', 'ALDH8A1', 'CNTD2', 'CT69', 'HBS1L', 'HMGA1P7', 'MYB', 'SGK1', 'SLC2A12']

Predicted Features

Class Amplicon Complexity Score
ecDNA 1 0.59590968
Image 1

Class Amplicon Complexity Score
Linear amplification 2 0.866157535
Image 2

Prediction

ecDNA: None


Prediction

No data