BT549_BREAST


Available Data

  • Vendor Karyotype
  • ecDNA Presence Verification from Literature
  • Amplicon Architect Prediction
  • Circle Hunter Prediction

ID Value
ATCC HTB-122
DSMZ None
Cellosaurus BT-549
Cosmic 905951.0

Property Value
% Polyploidy None
Ploidy Classification hypertriploid
Modal Chromosome Number 78.0
Modal Range Numeric 73-80
Marker Chromosomes Average Field 4.0
Primary or Metastasis Primary
Count of SV's 3

Details

ecDNA Present (Y/N/P): Y

Literature source: https://onlinelibrary.wiley.com/doi/full/10.1002/1098-2264%28200007%2928%3A3%3C308%3A%3AAID-GCC9%3E3.0.CO%3B2-B
https://www.nature.com/articles/nature21356

HSR Classification: N

ATCC Karyotype: modal number = 78; range = 73 to 80.The cell line is aneuploid human female, with chromosome counts in the hypertriploid range. The X chromosomes are all abnormal. Normal chromosomes N10 and N13 are clearly under-represented, with chromosomes N2, N12, and N17 also tending to be. Chromosome N8 is over-represented with respect to the copy number of other normal chromosomes, and chromosomes N5 and N18 also usually have more copies than most chromosomes. Four marker chromosomes are found: iso(13q), 10q+, del(X)(q22:), del(11)(p11:).

DSMZ Karyotype: No data

Heterogeneity Indications and Other Notes: No data

Download Breakpoint Edges CSV

Prediction

ecDNA Amplicon Predicted: N

Predicted Amplicon Classes: []

Predicted Genes on ecDNA

[]

Predicted Features

No features detected.


Prediction

ecDNA: negative


Prediction

No data